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1.
Vis Comput ; : 1-17, 2022 Apr 07.
Article in English | MEDLINE | ID: covidwho-20233228

ABSTRACT

The growing advocacy of thermal imagery in applications, such as autonomous vehicles, surveillance, and COVID-19 detection, necessitates accurate object detection frameworks for the thermal domain. Conventional methods could fall short, especially in situations with poor lighting, for instance, detection during night-time. In this paper, we propose a paced multi-stage block-wise framework for effectively detecting objects from thermal images. Our approach utilizes the pre-existing knowledge of deep neural network-based object detectors trained on large-scale natural image data to enhance performance in the thermal domain constructively. The employed, multi-stage approach drives our model to achieve higher accuracies. And the introduction of the pace parameter during domain adaption enables efficient training. Our experimental results demonstrate that the framework outperforms previous benchmarks on the FLIR ADAS dataset on the person, bicycle, and car categories. We have also illustrated further analysis of the framework, such as the effect of its components on accuracy and training efficiency, its generalizability to other thermal datasets, and its superior performance on night-time images in contrast to state-of-the-art RGB object detectors.

2.
15th International Conference on Developments in eSystems Engineering, DeSE 2023 ; 2023-January:333-338, 2023.
Article in English | Scopus | ID: covidwho-2324254

ABSTRACT

COVID-19 crisis has led to an outburst of information that needs to be organized, validated, and made available to the seekers. Despite the rapid growth and success of BERT models in the last 3 years, COVID QA is a difficult task due to the lack of applicable datasets and a relevant language representation. Therefore, this study proposes a transformer-based Question Answering (QA) model for COVID-19 questions from the biomedical domain. Further, explored several datasets, and models required for question type prediction, no-Answer prediction, and answer extraction and transfer learning strategies. It has been demonstrated that the exact match score can be significantly improved with limited amounts of training data from the biomedical domain. Finally, the findings of the study have been summarized as Factoid QA Finetuning Framework (FQFF), which can provide initial direction for domain-specific QA tasks with a limited amount of data. © 2023 IEEE.

3.
International Journal of Advanced Computer Science and Applications ; 14(4):456-463, 2023.
Article in English | Scopus | ID: covidwho-2321413

ABSTRACT

Online learning has gained a tremendous popularity in the last decade due to the facility to learn anytime, anything, anywhere from the ocean of web resources available. Especially the lockdown all over the world due to the Covid-19 pandemic has brought an enormous attention towards the online learning for value addition and skills development not only for the school/college students, but also to the working professionals. This massive growth in online learning has made the task of assessment very tedious and demands training, experience and resources. Automatic Question generation (AQG) techniques have been introduced to resolve this problem by deriving a question bank from the text documents. However, the performance of conventional AQG techniques is subject to the availability of large labelled training dataset. The requirement of deep linguistic knowledge for the generation of heuristic and hand-crafted rules to transform declarative sentence into interrogative sentence makes the problem further complicated. This paper presents a transfer learning-based text to text transformation model to generate the subjective and objective questions automatically from the text document. The proposed AQG model utilizes the Text-to-Text-Transfer-Transformer (T5) which reframes natural language processing tasks into a unified text-to-text-format and augments it with word sense disambiguation (WSD), ConceptNet and domain adaptation framework to improve the meaningfulness of the questions. Fast T5 library with beam-search decoding algorithm has been used here to reduce the model size and increase the speed of the model through quantization of the whole model by Open Neural Network Exchange (ONNX) framework. The keywords extraction in the proposed framework is performed using the Multipartite graphs to enhance the context awareness. The qualitative and quantitative performance of the proposed AQG model is evaluated through a comprehensive experimental analysis over the publicly available Squad dataset. © 2023, International Journal of Advanced Computer Science and Applications. All Rights Reserved.

4.
Journal of Intelligent & Fuzzy Systems ; 44(3):3733-3750, 2023.
Article in English | Web of Science | ID: covidwho-2308985

ABSTRACT

Transfer learning (TL) is further investigated in computer intelligence and artificial intelligence. Many TL methodologies have been suggested and applied to figure out the problem of practical applications, such as in natural language processing, classification models for COVID-19 disease, Alzheimer's disease detection, etc. FTL (fuzzy transfer learning) is an extension of TL that uses a fuzzy system to pertain to the vagueness and uncertainty parameters in TL, allowing the discovery of predicates and their evaluation of unclear data. Because of the system's increasing complexity, FTL is often utilized to further infer proper results without constructing the knowledge base and environment from scratch. Further, the uncertainty and vagueness in the daily data can arise and modify the process. It has been of great interest to design an FTL model that can handle the periodicity data with fast processing time and reasonable accuracy. This paper proposes a novel model to capture data related to periodical phenomena and enhance the quality of the existing inference process. The model performs knowledge transfer in the absence of reference or predictive information. An experimental stage on the UCI and real-life dataset compares our proposed model against the related methods regarding the number of rules, computing time, and accuracy. The experimental results validated the advantages and suitability of the proposed FTL model.

5.
14th IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, ASONAM 2022 ; : 159-162, 2022.
Article in English | Scopus | ID: covidwho-2306360

ABSTRACT

In the real-world application of COVID-19 misinformation detection, a fundamental challenge is the lack of the labeled COVID data to enable supervised end-to-end training of the models, especially at the early stage of the pandemic. To address this challenge, we propose an unsupervised domain adaptation framework using contrastive learning and adversarial domain mixup to transfer the knowledge from an existing source data domain to the target COVID-19 data domain. In particular, to bridge the gap between the source domain and the target domain, our method reduces a radial basis function (RBF) based discrepancy between these two domains. Moreover, we leverage the power of domain adversarial examples to establish an intermediate domain mixup, where the latent representations of the input text from both domains could be mixed during the training process. Extensive experiments on multiple real-world datasets suggest that our method can effectively adapt misinformation detection systems to the unseen COVID-19 target domain with significant improvements compared to the state-of-the-art baselines. © 2022 IEEE.

6.
2022 IEEE International Conference on Big Data, Big Data 2022 ; : 2305-2308, 2022.
Article in English | Scopus | ID: covidwho-2268291

ABSTRACT

Classifying whether collected information related to emerging topics and domains is fake/incorrect is not an easy task because we do not have enough labeled data in the domains. Given labeled data from source domains (e.g., gossip and health) and limited labeled data from a newly emerging target domain (e.g., COVID-19 and Ukraine war), simply applying knowledge learned from source domains to the target domain may not work well because of different data distribution. To solve the problem, in this paper, we propose an energy-based domain adaptation with active learning for early misinformation detection. Given three real world news datasets, we evaluate our proposed model against two baselines in both domain adaptation and the whole pipeline. Our model outperforms the baselines, improving at least 5% in the domain adaptation task and 10% in the whole pipeline, showing effectiveness of our proposed approach. © 2022 IEEE.

7.
Computer Vision, Eccv 2022, Pt Xxi ; 13681:627-643, 2022.
Article in English | Web of Science | ID: covidwho-2233939

ABSTRACT

As segmentation labels are scarce, extensive researches have been conducted to train segmentation networks with domain adaptation, semi-supervised or self-supervised learning techniques to utilize abundant unlabeled dataset. However, these approaches appear different from each other, so it is not clear how these approaches can be combined for better performance. Inspired by recent multi-domain image translation approaches, here we propose a novel segmentation framework using adaptive instance normalization (AdaIN), so that a single generator is trained to perform both domain adaptation and semi-supervised segmentation tasks via knowledge distillation by simply changing task-specific AdaIN codes. Specifically, our framework is designed to deal with difficult situations in chest X-ray radiograph (CXR) segmentation, where labels are only available for normal data, but the trained model should be applied to both normal and abnormal data. The proposed network demonstrates great generalizability under domain shift and achieves the state-of-the-art performance for abnormal CXR segmentation.

8.
Med Image Anal ; 83: 102664, 2022 Oct 22.
Article in English | MEDLINE | ID: covidwho-2229942

ABSTRACT

Pneumonia can be difficult to diagnose since its symptoms are too variable, and the radiographic signs are often very similar to those seen in other illnesses such as a cold or influenza. Deep neural networks have shown promising performance in automated pneumonia diagnosis using chest X-ray radiography, allowing mass screening and early intervention to reduce the severe cases and death toll. However, they usually require many well-labelled chest X-ray images for training to achieve high diagnostic accuracy. To reduce the need for training data and annotation resources, we propose a novel method called Contrastive Domain Adaptation with Consistency Match (CDACM). It transfers the knowledge from different but relevant datasets to the unlabelled small-size target dataset and improves the semantic quality of the learnt representations. Specifically, we design a conditional domain adversarial network to exploit discriminative information conveyed in the predictions to mitigate the domain gap between the source and target datasets. Furthermore, due to the small scale of the target dataset, we construct a feature cloud for each target sample and leverage contrastive learning to extract more discriminative features. Lastly, we propose adaptive feature cloud expansion to push the decision boundary to a low-density area. Unlike most existing transfer learning methods that aim only to mitigate the domain gap, our method instead simultaneously considers the domain gap and the data deficiency problem of the target dataset. The conditional domain adaptation and the feature cloud generation of our method are learning jointly to extract discriminative features in an end-to-end manner. Besides, the adaptive feature cloud expansion improves the model's generalisation ability in the target domain. Extensive experiments on pneumonia and COVID-19 diagnosis tasks demonstrate that our method outperforms several state-of-the-art unsupervised domain adaptation approaches, which verifies the effectiveness of CDACM for automated pneumonia diagnosis using chest X-ray imaging.

9.
2022 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2022 ; : 1185-1192, 2022.
Article in English | Scopus | ID: covidwho-2223085

ABSTRACT

Previous pneumonia classification algorithms have succeeded in the clinic under closed and static environments. However, in the real world, the emergence of new categories (e.g., COVID-19) and changes in data distribution will cause the existing methods to lose their robustness. In this paper, we formalize this problem as medical open-set domain adaptation under open and dynamic environments. The critical challenge of this problem is to accurately detect the open class samples with subtle differences from the common class. To achieve that, we propose transferable discriminative learning that remarkably achieves robust pneumonia classification with distribution shift and open class emerging. First, we propose the transferable high-density clustering module to detect open class samples and obtain reliable common class samples by considering the density degree. Secondly, we present the transferable triplet loss to enlarge the semantic feature difference between common class and open class samples. Finally, we design the transferable scoring function to detect open class samples effectively. A series of empirical studies show that our algorithm remarkably outperforms state-of-the-art methods. This result demonstrates its potential as a clinical tool for medical open-set domain adaptation. © 2022 IEEE.

10.
Knowl Based Syst ; 264: 110324, 2023 Mar 15.
Article in English | MEDLINE | ID: covidwho-2181234

ABSTRACT

In the wake of the Coronavirus disease (COVID-19) pandemic, chest computed tomography (CT) has become an invaluable component in the rapid and accurate detection of COVID-19. CT scans traditionally require manual inspections from medical professionals, which is expensive and tedious. With advancements in machine learning, deep neural networks have been applied to classify CT scans for efficient diagnosis. However, three challenges hinder this application of deep learning: (1) Domain shift across CT platforms and human subjects impedes the performance of neural networks in different hospitals. (2) Unsupervised Domain Adaptation (UDA), the traditional method to overcome domain shift, typically requires access to both source and target data. This is not realistic in COVID-19 diagnosis due to the sensitivity of medical data. The privacy of patients must be protected. (3) Data imbalance may exist between easy/hard samples and between data classes which can overwhelm the training of deep networks, causing degenerate models. To overcome these challenges, we propose a Cross-Platform Privacy-Preserving COVID-19 diagnosis network (CP 3 Net) that integrates domain adaptation, self-supervised learning, imbalanced label learning, and rotation classifier training into one synergistic framework. We also create a new CT benchmark by combining real-world datasets from multiple medical platforms to facilitate the cross-domain evaluation of our method. Through extensive experiments, we demonstrate that CP 3 Net outperforms many popular UDA methods and achieves state-of-the-art results in diagnosing COVID-19 using CT scans.

11.
Evolving Systems ; 2023.
Article in English | Scopus | ID: covidwho-2175151

ABSTRACT

In recent years, deep learning techniques have been widely used to diagnose diseases. However, in some tasks, such as the diagnosis of COVID-19 disease, due to insufficient data, the model is not properly trained and as a result, the generalizability of the model decreases. For example, if the model is trained on a CT scan dataset and tested on another CT scan dataset, it predicts near-random results. To address this, data from several different sources can be combined using transfer learning, taking into account the intrinsic and natural differences in existing datasets obtained with different medical imaging tools and approaches. In this paper, to improve the transfer learning technique and better generalizability between multiple data sources, we propose a multi-source adversarial transfer learning model, namely AMTLDC. In AMTLDC, representations are learned that are similar among the sources. In other words, extracted representations are general and not dependent on the particular dataset domain. We apply the AMTLDC to predict Covid-19 from medical images using a convolutional neural network. We show that accuracy can be improved using the AMTLDC framework, and surpass the results of current successful transfer learning approaches. In particular, we show that the AMTLDC works well when using different dataset domains, or when there is insufficient data. © 2023, The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

12.
13th International Conference on Language Resources and Evaluation Conference, LREC 2022 ; : 6719-6727, 2022.
Article in English | Scopus | ID: covidwho-2170227

ABSTRACT

Previous research for adapting a general neural machine translation (NMT) model into a specific domain usually neglects the diversity in translation within the same domain, which is a core problem for domain adaptation in real-world scenarios. One representative of such challenging scenarios is to deploy a translation system for a conference with a specific topic, e.g., global warming or coronavirus, where there are usually extremely less resources due to the limited schedule. To motivate wider investigation in such a scenario, we present a real-world fine-grained domain adaptation task in machine translation (FGraDA). The FGraDA dataset consists of Chinese-English translation task for four sub-domains of information technology: autonomous vehicles, AI education, real-time networks, and smart phone. Each sub-domain is equipped with a development set and test set for evaluation purposes. To be closer to reality, FGraDA does not employ any in-domain bilingual training data but provides bilingual dictionaries and wiki knowledge base, which can be easier obtained within a short time. We benchmark the fine-grained domain adaptation task and present in-depth analyses showing that there are still challenging problems to further improve the performance with heterogeneous resources. © European Language Resources Association (ELRA), licensed under CC-BY-NC-4.0.

13.
31st ACM International Conference on Information and Knowledge Management, CIKM 2022 ; : 2423-2433, 2022.
Article in English | Scopus | ID: covidwho-2108338

ABSTRACT

Despite recent progress in improving the performance of misinformation detection systems, classifying misinformation in an unseen domain remains an elusive challenge. To address this issue, a common approach is to introduce a domain critic and encourage domain-invariant input features. However, early misinformation often demonstrates both conditional and label shifts against existing misinformation data (e.g., class imbalance in COVID-19 datasets), rendering such methods less effective for detecting early misinformation. In this paper, we propose contrastive adaptation network for early misinformation detection (CANMD). Specifically, we leverage pseudo labeling to generate high-confidence target examples for joint training with source data. We additionally design a label correction component to estimate and correct the label shifts (i.e., class priors) between the source and target domains. Moreover, a contrastive adaptation loss is integrated in the objective function to reduce the intra-class discrepancy and enlarge the inter-class discrepancy. As such, the adapted model learns corrected class priors and an invariant conditional distribution across both domains for improved estimation of the target data distribution. To demonstrate the effectiveness of the proposed CANMD, we study the case of COVID-19 early misinformation detection and perform extensive experiments using multiple real-world datasets. The results suggest that CANMD can effectively adapt misinformation detection systems to the unseen COVID-19 target domain with significant improvements compared to the state-of-the-art baselines. © 2022 ACM.

14.
31st International Conference on Computer Communications and Networks, ICCCN 2022 ; 2022-July, 2022.
Article in English | Scopus | ID: covidwho-2051981

ABSTRACT

There is a growing trend for people to perform work-outs at home due to the global pandemic of COVID-19 and the stay-at-home policy of many countries. Since a self-designed fitness plan often lacks professional guidance to achieve ideal outcomes, it is important to have an in-home fitness monitoring system that can track the exercise process of users. Traditional camera-based fitness monitoring may raise serious privacy concerns, while sensor-based methods require users to wear dedicated devices. Recently, researchers propose to utilize RF signals to enable non-intrusive fitness monitoring, but these approaches all require huge training efforts from users to achieve a satisfactory performance, especially when the system is used by multiple users (e.g., family members). In this work, we design and implement a fitness monitoring system using a single COTS mm Wave device. The proposed system integrates workout recognition, user identification, multi-user monitoring, and training effort reduction modules and makes them work together in a single system. In particular, we develop a domain adaptation framework to reduce the amount of training data collected from different domains via mitigating impacts caused by domain characteristics embedded in mm Wave signals. We also develop a GAN-assisted method to achieve better user identification and workout recognition when only limited training data from the same domain is available. We propose a unique spatialtemporal heatmap feature to achieve personalized workout recognition and develop a clustering-based method for concurrent workout monitoring. Extensive experiments with 14 typical workouts involving 11 participants demonstrate that our system can achieve 97% average workout recognition accuracy and 91% user identification accuracy. © 2022 IEEE.

15.
Med Image Anal ; 82: 102623, 2022 11.
Article in English | MEDLINE | ID: covidwho-2042023

ABSTRACT

Medical image segmentation methods based on deep learning have made remarkable progress. However, such existing methods are sensitive to data distribution. Therefore, slight domain shifts will cause a decline of performance in practical applications. To relieve this problem, many domain adaptation methods learn domain-invariant representations by alignment or adversarial training whereas ignoring domain-specific representations. In response to this issue, this paper rethinks the traditional domain adaptation framework and proposes a novel orthogonal decomposition adversarial domain adaptation (ODADA) architecture for medical image segmentation. The main idea behind our proposed ODADA model is to decompose the input features into domain-invariant and domain-specific representations and then use the newly designed orthogonal loss function to encourage their independence. Furthermore, we propose a two-step optimization strategy to extract domain-invariant representations by separating domain-specific representations, fighting the performance degradation caused by domain shifts. Encouragingly, the proposed ODADA framework is plug-and-play and can replace the traditional adversarial domain adaptation module. The proposed method has consistently demonstrated effectiveness through comprehensive experiments on three publicly available datasets, including cross-site prostate segmentation dataset, cross-site COVID-19 lesion segmentation dataset, and cross-modality cardiac segmentation dataset. The source code is available at https://github.com/YonghengSun1997/ODADA.


Subject(s)
COVID-19 , Humans , Image Processing, Computer-Assisted/methods
16.
2022 Iberian Languages Evaluation Forum, IberLEF 2022 ; 3202, 2022.
Article in English | Scopus | ID: covidwho-2027076

ABSTRACT

Recent releases of pre-trained language models and Question Answering (QA) datasets have led to rapid improvements in Extractive QA. This paper describes the work done for QuALES, part of IberLEF 2022, a task to automatically find answers to questions in Spanish from news text related to Covid-19. We present an approach mainly centered on transfer learning applied to BETO and RoBERTa-base-bne based models. The models were fine tuned on different combinations of Spanish QA datasets. Our submission achieved third place in QuALES challenge for Exact Match and F1-Score metrics. © 2022 Copyright for this paper by its authors. Use permitted under Creative Commons License Attribution 4.0 International (CC BY 4.0).

17.
Jilin Daxue Xuebao (Gongxueban)/Journal of Jilin University (Engineering and Technology Edition) ; 52(7):1626-1638, 2022.
Article in Chinese | Scopus | ID: covidwho-2025657

ABSTRACT

In the unsupervised domain adaptive transfer learning process,domain-independent features lead to the degradation of model segmentation performance,but there is no effective feature selection method for transfer learning segmentation model at present. To solve this problem,a general feature selection module for transfer learning was proposed based on optimal transport,which can be applied to various unsupervised domain adaptive image segmentation models. In this module,the optimal sample subsets of two domains are selected by weighted optimal transport of segmentation accuracy,and then the features of sample subsets are subjected to entropy regularized optimal transport,so as to obtain a descending list of similarity between two domains to remove domain-independent features. The universal feature selection module is applied to three unsupervised domain adaptive models to solve the problem of Covid-19 image segmentation,which improves the model performance to a certain extent. © 2022 Editorial Board of Jilin University. All rights reserved.

18.
J Imaging ; 8(9)2022 Aug 30.
Article in English | MEDLINE | ID: covidwho-2006096

ABSTRACT

Deep learning methods provide significant assistance in analyzing coronavirus disease (COVID-19) in chest computed tomography (CT) images, including identification, severity assessment, and segmentation. Although the earlier developed methods address the lack of data and specific annotations, the current goal is to build a robust algorithm for clinical use, having a larger pool of available data. With the larger datasets, the domain shift problem arises, affecting the performance of methods on the unseen data. One of the critical sources of domain shift in CT images is the difference in reconstruction kernels used to generate images from the raw data (sinograms). In this paper, we show a decrease in the COVID-19 segmentation quality of the model trained on the smooth and tested on the sharp reconstruction kernels. Furthermore, we compare several domain adaptation approaches to tackle the problem, such as task-specific augmentation and unsupervised adversarial learning. Finally, we propose the unsupervised adaptation method, called F-Consistency, that outperforms the previous approaches. Our method exploits a set of unlabeled CT image pairs which differ only in reconstruction kernels within every pair. It enforces the similarity of the network's hidden representations (feature maps) by minimizing the mean squared error (MSE) between paired feature maps. We show our method achieving a 0.64 Dice Score on the test dataset with unseen sharp kernels, compared to the 0.56 Dice Score of the baseline model. Moreover, F-Consistency scores 0.80 Dice Score between predictions on the paired images, which almost doubles the baseline score of 0.46 and surpasses the other methods. We also show F-Consistency to better generalize on the unseen kernels and without the presence of the COVID-19 lesions than the other methods trained on unlabeled data.

19.
2022 Workshop on Scientific Document Understanding, SDU 2022 ; 3164, 2022.
Article in English | Scopus | ID: covidwho-1958163

ABSTRACT

MeSH (Medical Subject Headings) is a large thesaurus created by the National Library of Medicine and used for fine-grained indexing of publications in the biomedical domain. In the context of the COVID-19 pandemic, MeSH descriptors have emerged in relation to articles published on the corresponding topic. Zero-shot classification is an adequate response for timely labeling of the stream of papers with MeSH categories. In this work, we hypothesise that rich semantic information available in MeSH has potential to improve BioBERT representations and make them more suitable for zero-shot/few-shot tasks. We frame the problem as determining if MeSH term definitions, concatenated with paper s are valid instances or not, and leverage multi-task learning to induce the MeSH hierarchy in the representations thanks to a seq2seq task. Results establish a baseline on the MedLine and LitCovid datasets, and probing shows that the resulting representations convey the hierarchical relations present in MeSH. © 2021 Copyright for this paper by its authors.

20.
Appl Soft Comput ; 125: 109205, 2022 Aug.
Article in English | MEDLINE | ID: covidwho-1906769

ABSTRACT

The outbreak of COVID-19 threatens the safety of all human beings. Rapid and accurate diagnosis of patients is the effective way to prevent the rapid spread of COVID-19. The current computer-aided diagnosis of COVID-19 requires extensive labeled data for training, and this undoubtedly increases human and material resources costs. Domain adaptation (DA), an existing promising approach, can transfer knowledge from rich labeled pneumonia datasets for COVID-19 diagnosis and classification. However, due to the differences in feature distribution and task semantic between pneumonia and COVID-19, negative transfer may reduce the performance in diagnosis COVID-19 and pneumonia. Furthermore, the training data is usually mixed with many noise samples in practice, and this also poses new challenges for domain adaptation. As a kind of domain adaptation, partial domain adaptation (PDA) can well avoid outlier samples in the source domain and achieve good classification performance in the target domain. However, the existing PDA methods all learn a single feature representation; this can only learn local information about the inputs and ignore other important information in the samples. Therefore multi-attention representation network partial domain adaptation (MARPDA) is proposed in this paper to overcome the above shortcomings of PDA. In MARPDA, we construct the multiple representation networks with attention to acquire the image representation and effectively learn knowledge from different feature spaces. We design the sample-weighted strategy to achieve partial data transfer and address the negative transfer of noise data during training. MARPDA adapts to complex application scenarios and learns fine-grained features of the image from multiple representations. We apply the model to classify pneumonia and COVID-19 respectively, and evaluate it in qualitative and quantitative manners. The experimental results show that our classification accuracy is higher than that of the existing state-of-the-art methods. The stability and reliability of the proposed method are validated by the confusion matrix and the performance curves experiments. In summary, our method has better performance for diagnosis COVID-19 compared to the existing state-of-the-art methods.

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